HL_1NWY_012

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUUCGUGAAAC

Length

11 nucleotides

Bulged bases

1NWY|1|0|G|399, 1NWY|1|0|U|400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1NWY_012 not in the Motif Atlas

Homologous match to HL_7A0S_013

Geometric discrepancy: 0.4373

The information below is about HL_7A0S_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.8

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

1NWY|1|0|G|395
1NWY|1|0|U|396
1NWY|1|0|U|397
1NWY|1|0|C|398
1NWY|1|0|G|399
1NWY|1|0|U|400
1NWY|1|0|G|401
1NWY|1|0|A|402
1NWY|1|0|A|403
1NWY|1|0|A|404
1NWY|1|0|C|405

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain Y

ribosomal protein L31