HL_1NWY_023

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UUGAGG

Length

6 nucleotides

Bulged bases

1NWY|1|0|U|840, 1NWY|1|0|G|843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1NWY_023 not in the Motif Atlas

Geometric match to HL_7A0S_024

Geometric discrepancy: 0.202

The information below is about HL_7A0S_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.2

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

1NWY|1|0|U|839
1NWY|1|0|U|840
1NWY|1|0|G|841
1NWY|1|0|A|842
1NWY|1|0|G|843
1NWY|1|0|G|844

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain J

ribosomal protein L15