HL_1NWY_028

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1NWY_028 not in the Motif Atlas

Homologous match to HL_7RQB_030

Geometric discrepancy: 0.4081

The information below is about HL_7RQB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NWY|1|0|C|1103
1NWY|1|0|G|1104
1NWY|1|0|U|1105
1NWY|1|0|A|1106
1NWY|1|0|A|1107
1NWY|1|0|U|1108
1NWY|1|0|A|1109
1NWY|1|0|G|1110

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain 4

ribosomal protein L36

Chain E

ribosomal protein L6

Chain G

ribosomal protein L11