HL_1NWY_034

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGUCAAGAUUCC

Length

12 nucleotides

Bulged bases

1NWY|1|0|U|1409

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1NWY_034 not in the Motif Atlas

Geometric match to HL_7VTI_001

Geometric discrepancy: 0.237

The information below is about HL_7VTI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.3

Basepair signature

cWW-F-F

Number of instances in this motif group

23

Unit IDs

1NWY|1|0|G|1401
1NWY|1|0|G|1402
1NWY|1|0|U|1403
1NWY|1|0|C|1404
1NWY|1|0|A|1405
1NWY|1|0|A|1406
1NWY|1|0|G|1407
1NWY|1|0|A|1408
1NWY|1|0|U|1409
1NWY|1|0|U|1410
1NWY|1|0|C|1411
1NWY|1|0|C|1412

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain R

ribosomal protein L23