HL_1NWY_057

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1NWY_057 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.2819

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

1NWY|1|0|A|2450
1NWY|1|0|G|2451
1NWY|1|0|U|2452
1NWY|1|0|C|2453
1NWY|1|0|C|2454
1NWY|1|0|A|2455
1NWY|1|0|U|2456
1NWY|1|0|A|2457
1NWY|1|0|U|2458

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain 4

ribosomal protein L36

Chain T

general stress protein Ctc