HL_1OOA_001
3D structure
- PDB id
- 1OOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF NF-kB(p50)2 COMPLEXED TO A HIGH-AFFINITY RNA APTAMER
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.45 Å
Loop
- Sequence
- UGUAAG
- Length
- 6 nucleotides
- Bulged bases
- 1OOA|1|C|A|16
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_04783.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
1OOA|1|C|U|13
1OOA|1|C|G|14
1OOA|1|C|U|15
1OOA|1|C|A|16
1OOA|1|C|A|17
1OOA|1|C|G|18
Current chains
- Chain C
- RNA aptamer
Nearby chains
- Chain A
- Nuclear factor NF-kappa-B p105 subunit
Coloring options: