HL_1Q7Y_024
3D structure
- PDB id
- 1Q7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UCCUACAAUA
- Length
- 10 nucleotides
- Bulged bases
- 1Q7Y|1|A|U|840, 1Q7Y|1|A|A|844, 1Q7Y|1|A|U|845
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1Q7Y_024 not in the Motif Atlas
- Homologous match to HL_4V9F_024
- Geometric discrepancy: 0.0705
- The information below is about HL_4V9F_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
1Q7Y|1|A|U|837
1Q7Y|1|A|C|838
1Q7Y|1|A|C|839
1Q7Y|1|A|U|840
1Q7Y|1|A|A|841
1Q7Y|1|A|C|842
1Q7Y|1|A|A|843
1Q7Y|1|A|A|844
1Q7Y|1|A|U|845
1Q7Y|1|A|A|846
Current chains
- Chain A
- 23S ribosomal rna
Nearby chains
- Chain 2
- 50S ribosomal protein L37e
- Chain D
- 50S ribosomal protein L3P
- Chain S
- 50S ribosomal protein L22P
Coloring options: