HL_1Q7Y_030

3D structure

PDB id

1Q7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

1Q7Y|1|A|A|1174

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Q7Y_030 not in the Motif Atlas

Homologous match to HL_4V9F_030

Geometric discrepancy: 0.227

The information below is about HL_4V9F_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92304.1

Basepair signature

cWW-cSW-R-R-tSH-R-R

Number of instances in this motif group

5

Unit IDs

1Q7Y|1|A|C|1168
1Q7Y|1|A|U|1169
1Q7Y|1|A|U|1170
1Q7Y|1|A|A|1171
1Q7Y|1|A|G|1172
1Q7Y|1|A|A|1173
1Q7Y|1|A|A|1174
1Q7Y|1|A|G|1175
1Q7Y|1|A|C|1176
1Q7Y|1|A|A|1177
1Q7Y|1|A|G|1178

Current chains

Chain A

23S ribosomal rna

Nearby chains