HL_1Q82_018
3D structure
- PDB id
- 1Q82 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of CC-Puromycin bound to the A-site of the 50S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.98 Å
Loop
- Sequence
- UUUUGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 1Q82|1|A|A|631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1Q82_018 not in the Motif Atlas
- Geometric match to HL_4WF9_018
- Geometric discrepancy: 0.2041
- The information below is about HL_4WF9_018
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.4
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 137
Unit IDs
1Q82|1|A|U|623
1Q82|1|A|U|624
1Q82|1|A|U|625
1Q82|1|A|U|626
1Q82|1|A|G|627
1Q82|1|A|A|628
1Q82|1|A|A|629
1Q82|1|A|A|630
1Q82|1|A|A|631
1Q82|1|A|A|632
Current chains
- Chain A
- 23S ribosomal rna
Nearby chains
- Chain D
- 50S ribosomal protein L3P
- Chain M
- 50S ribosomal protein L15P
- Chain Z
- 50S ribosomal protein L32E
Coloring options: