HL_1Q82_064
3D structure
- PDB id
- 1Q82 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of CC-Puromycin bound to the A-site of the 50S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.98 Å
Loop
- Sequence
- GUUGUUCGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1Q82_064 not in the Motif Atlas
- Geometric match to HL_4V90_032
- Geometric discrepancy: 0.3992
- The information below is about HL_4V90_032
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.4
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 14
Unit IDs
1Q82|1|A|G|2585
1Q82|1|A|U|2586
1Q82|1|A|U|2587
1Q82|1|A|G|2588
1Q82|1|A|U|2589
1Q82|1|A|U|2590
1Q82|1|A|C|2591
1Q82|1|A|G|2592
1Q82|1|A|C|2593
Current chains
- Chain A
- 23S ribosomal rna
Nearby chains
- Chain 5
- CC-puromycin
- Chain D
- 50S ribosomal protein L3P
- Chain L
- 50S ribosomal protein L14P
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