HL_1QVF_068
3D structure
- PDB id
- 1QVF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGAACGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 1QVF|1|0|G|2786, 1QVF|1|0|C|2790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1QVF_068 not in the Motif Atlas
- Homologous match to HL_4V9F_068
- Geometric discrepancy: 0.0256
- The information below is about HL_4V9F_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_74055.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
1QVF|1|0|C|2780
1QVF|1|0|U|2781
1QVF|1|0|G|2782
1QVF|1|0|A|2783
1QVF|1|0|A|2784
1QVF|1|0|C|2785
1QVF|1|0|G|2786
1QVF|1|0|C|2787
1QVF|1|0|A|2788
1QVF|1|0|U|2789
1QVF|1|0|C|2790
1QVF|1|0|U|2791
1QVF|1|0|A|2792
1QVF|1|0|A|2793
1QVF|1|0|G|2794
Current chains
- Chain 0
- 23S ribosomal rna
Nearby chains
- Chain E
- 50S ribosomal protein L6P
- Chain I
- 50S ribosomal protein L13P
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