HL_1S03_001

3D structure

PDB id

1S03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Structure of a Ribosomal Protein S8/spc Operon mRNA Complex

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

AGGCAAUU

Length

8 nucleotides

Bulged bases

1S03|1|A|U|28

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

1S03|1|A|A|22
1S03|1|A|G|23
1S03|1|A|G|24
1S03|1|A|C|25
1S03|1|A|A|26
1S03|1|A|A|27
1S03|1|A|U|28
1S03|1|A|U|29

Current chains

Chain A

47-MER

Nearby chains

Chain B

47-MER

Chain H

30S ribosomal protein S8