HL_1S72_010

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

UUGGAACA

Length

8 nucleotides

Bulged bases

1S72|1|0|C|318

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97270.8

Basepair signature

cWW-tWH-R-R-R

Number of instances in this motif group

21

Unit IDs

1S72|1|0|U|312
1S72|1|0|U|313
1S72|1|0|G|314
1S72|1|0|G|315
1S72|1|0|A|316
1S72|1|0|A|317
1S72|1|0|C|318
1S72|1|0|A|319

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L4E

Chain T

50S ribosomal protein L24P

Chain Y

50S ribosomal protein L32E