3D structure

PDB id
1S72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
Experimental method
X-RAY DIFFRACTION
Resolution
2.4 Å

Loop

Sequence
UCAGAAG
Length
7 nucleotides
Bulged bases
1S72|1|0|A|497
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_74411.3
Basepair signature
cWW-tSH-R-R
Number of instances in this motif group
18

Unit IDs

1S72|1|0|U|493
1S72|1|0|C|494
1S72|1|0|A|495
1S72|1|0|G|496
1S72|1|0|A|497
1S72|1|0|A|498
1S72|1|0|G|499

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L39e
Chain R
50S ribosomal protein L22P

Coloring options:

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