HL_1VVJ_070
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- GGUCGUC
- Length
- 7 nucleotides
- Bulged bases
- 1VVJ|1|RA|G|1325, 1VVJ|1|RA|U|1329
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1VVJ_070 not in the Motif Atlas
- Homologous match to HL_7RQB_034
- Geometric discrepancy: 0.0968
- The information below is about HL_7RQB_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_46680.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 27
Unit IDs
1VVJ|1|RA|G|1324
1VVJ|1|RA|G|1325
1VVJ|1|RA|U|1326
1VVJ|1|RA|C|1327
1VVJ|1|RA|G|1328
1VVJ|1|RA|U|1329
1VVJ|1|RA|C|1330
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RR
- 50S ribosomal protein L17
- Chain RW
- 50S ribosomal protein L22
Coloring options: