HL_1VW3_023

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACUAAU

Length

6 nucleotides

Bulged bases

1VW3|1|A|U|1205, 1VW3|1|A|A|1207

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1VW3_023 not in the Motif Atlas

Geometric match to HL_5T16_002

Geometric discrepancy: 0.1341

The information below is about HL_5T16_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_56334.1

Basepair signature

cWW-F

Number of instances in this motif group

16

Unit IDs

1VW3|1|A|A|1195
1VW3|1|A|C|1196
1VW3|1|A|U|1205
1VW3|1|A|A|1206
1VW3|1|A|A|1207
1VW3|1|A|U|1208

Current chains

Chain A

21S ribosomal RNA

Nearby chains