HL_1VW3_031

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAGUC

Length

7 nucleotides

Bulged bases

1VW3|1|A|U|1645, 1VW3|1|A|U|1648

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39895.11

Basepair signature

cWW-tSW-R

Number of instances in this motif group

46

Unit IDs

1VW3|1|A|G|1643
1VW3|1|A|U|1644
1VW3|1|A|U|1645
1VW3|1|A|A|1646
1VW3|1|A|G|1647
1VW3|1|A|U|1648
1VW3|1|A|C|1649

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial