HL_1VWW_016

3D structure

PDB id

1VWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

1VWW|1|5|C|1439

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92260.1

Basepair signature

cWW-R

Number of instances in this motif group

2

Unit IDs

1VWW|1|5|C|1436
1VWW|1|5|C|1437
1VWW|1|5|U|1438
1VWW|1|5|C|1439
1VWW|1|5|U|1440
1VWW|1|5|C|1441
1VWW|1|5|C|1442
1VWW|1|5|A|1443
1VWW|1|5|G|1444
1VWW|1|5|U|1445
1VWW|1|5|C|1446
1VWW|1|5|C|1447
1VWW|1|5|G|1448

Current chains

Chain 5

28S ribosomal RNA

Nearby chains