HL_1VWW_031
3D structure
- PDB id
- 1VWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GCCUC
- Length
- 5 nucleotides
- Bulged bases
- 1VWW|1|5|C|2488, 1VWW|1|5|C|2489
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_72498.16
- Basepair signature
- cWW-tWH-R-R-R
- Number of instances in this motif group
- 76
Unit IDs
1VWW|1|5|G|2487
1VWW|1|5|C|2488
1VWW|1|5|C|2489
1VWW|1|5|U|2490
1VWW|1|5|C|2491
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA
Coloring options: