HL_1VWW_032

3D structure

PDB id

1VWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUUCAGAUCCC

Length

12 nucleotides

Bulged bases

1VWW|1|5|U|2530, 1VWW|1|5|C|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80459.7

Basepair signature

cWW-R-R

Number of instances in this motif group

11

Unit IDs

1VWW|1|5|G|2522
1VWW|1|5|G|2523
1VWW|1|5|U|2524
1VWW|1|5|U|2525
1VWW|1|5|C|2526
1VWW|1|5|A|2527
1VWW|1|5|G|2528
1VWW|1|5|A|2529
1VWW|1|5|U|2530
1VWW|1|5|C|2531
1VWW|1|5|C|2532
1VWW|1|5|C|2533

Current chains

Chain 5

28S ribosomal RNA

Nearby chains