HL_1VWW_065

3D structure

PDB id

1VWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUCGUAGACGACCUG

Length

15 nucleotides

Bulged bases

1VWW|1|5|U|4976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67042.16

Basepair signature

cWW-tSH-R-R

Number of instances in this motif group

321

Unit IDs

1VWW|1|5|U|4972
1VWW|1|5|U|4973
1VWW|1|5|C|4974
1VWW|1|5|G|4975
1VWW|1|5|U|4976
1VWW|1|5|A|4977
1VWW|1|5|G|4978
1VWW|1|5|A|4979
1VWW|1|5|C|4980
1VWW|1|5|G|4981
1VWW|1|5|A|4982
1VWW|1|5|C|4983
1VWW|1|5|C|4984
1VWW|1|5|U|4985
1VWW|1|5|G|4986

Current chains

Chain 5

28S ribosomal RNA

Nearby chains