HL_1VX2_020
3D structure
- PDB id
- 1VX2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 1VX2|1|2|U|1061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_46175.5
- Basepair signature
- cWW-R-tSH-R-R-R-R
- Number of instances in this motif group
- 18
Unit IDs
1VX2|1|2|G|1054
1VX2|1|2|A|1055
1VX2|1|2|U|1056
1VX2|1|2|C|1057
1VX2|1|2|A|1058
1VX2|1|2|G|1059
1VX2|1|2|A|1060
1VX2|1|2|U|1061
1VX2|1|2|A|1062
1VX2|1|2|C|1063
1VX2|1|2|C|1064
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 4
- Messenger RNA
- Chain 6
- P/E tRNA
- Chain O
- Ribosomal protein uS11
- Chain a
- Ribosomal protein eS26
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