HL_1VX2_040

3D structure

PDB id

1VX2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGUGGUAAUUCUAGA

Length

15 nucleotides

Bulged bases

1VX2|1|2|U|160, 1VX2|1|2|U|161

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VX2|1|2|U|152
1VX2|1|2|G|153
1VX2|1|2|U|154
1VX2|1|2|G|155
1VX2|1|2|G|156
1VX2|1|2|U|157
1VX2|1|2|A|158
1VX2|1|2|A|159
1VX2|1|2|U|160
1VX2|1|2|U|161
1VX2|1|2|C|162
1VX2|1|2|U|163
1VX2|1|2|A|164
1VX2|1|2|G|165
1VX2|1|2|A|166

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

Ribosomal protein eS6

Chain Y

Ribosomal protein eS24