HL_1W2B_018
3D structure
- PDB id
- 1W2B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Trigger Factor ribosome binding domain in complex with 50S
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- UUUUGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 1W2B|1|0|A|631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1W2B_018 not in the Motif Atlas
- Geometric match to HL_4WF9_018
- Geometric discrepancy: 0.2071
- The information below is about HL_4WF9_018
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 96
Unit IDs
1W2B|1|0|U|623
1W2B|1|0|U|624
1W2B|1|0|U|625
1W2B|1|0|U|626
1W2B|1|0|G|627
1W2B|1|0|A|628
1W2B|1|0|A|629
1W2B|1|0|A|630
1W2B|1|0|A|631
1W2B|1|0|A|632
Current chains
- Chain 0
- 23S RRNA
Nearby chains
- Chain B
- 50S RIBOSOMAL PROTEIN L3P
- Chain K
- 50S RIBOSOMAL PROTEIN L15P
- Chain X
- 50S RIBOSOMAL PROTEIN L32E
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