HL_1XMO_034
3D structure
- PDB id
- 1XMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of mnm5U34t6A37-tRNALysUUU Complexed with AAG-mRNA in the Decoding Center
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- ACU(MNU)UU(T6A)AU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1XMO_034 not in the Motif Atlas
- Geometric match to HL_4B3R_034
- Geometric discrepancy: 0.1651
- The information below is about HL_4B3R_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 46
Unit IDs
1XMO|1|X|A|31
1XMO|1|X|C|32
1XMO|1|X|U|33
1XMO|1|X|MNU|34
1XMO|1|X|U|35
1XMO|1|X|U|36
1XMO|1|X|T6A|37
1XMO|1|X|A|38
1XMO|1|X|U|39
Current chains
- Chain X
- Anticodon Transfer RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain L
- 30S ribosomal protein S12
- Chain M
- 30S ribosomal protein S13
- Chain W
- A-Site Messenger RNA
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