3D structure

PDB id
1Y0Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of an active group I ribozyme-product complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CUUCUAG
Length
7 nucleotides
Bulged bases
1Y0Q|1|A|U|173
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_70352.1
Basepair signature
cWW-tSH-R
Number of instances in this motif group
2

Unit IDs

1Y0Q|1|A|C|171
1Y0Q|1|A|U|172
1Y0Q|1|A|U|173
1Y0Q|1|A|C|174
1Y0Q|1|A|U|175
1Y0Q|1|A|A|176
1Y0Q|1|A|G|177

Current chains

Chain A
Group I ribozyme

Nearby chains

No other chains within 10Å

Coloring options:

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