Motif HL_70352.1 Version HL_70352.1 of this group appears in releases 3.3 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V9F_019 | 4V9F | 0.0000 | 2 | 0 | LSU rRNA | G | 670 | A | 671 | U | 673 | U | 675 | C | 676 | cWW | tSH |
| 2 | HL_1Y0Q_006 | 1Y0Q | 0.4446 | 2 | A | Group I catalytic intron | C | 171 | U | 172 | C | 174 | A | 176 | G | 177 | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGUAUC | 1 |
| CUUCUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUAU | 1 |
| UUCUA | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-R
- Heat map statistics
- Min 0.44 | Avg 0.22 | Max 0.44
Coloring options: