HL_1Y0Q_008

3D structure

PDB id

1Y0Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of an active group I ribozyme-product complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GAGUAACGAAC

Length

11 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50622.2

Basepair signature

cWW-R-R-R-R-R-R-R-R

Number of instances in this motif group

6

Unit IDs

1Y0Q|1|A|G|224
1Y0Q|1|A|A|225
1Y0Q|1|A|G|226
1Y0Q|1|A|U|227
1Y0Q|1|A|A|228
1Y0Q|1|A|A|229
1Y0Q|1|A|C|230
1Y0Q|1|A|G|231
1Y0Q|1|A|A|232
1Y0Q|1|A|A|233
1Y0Q|1|A|C|234

Current chains

Chain A

Group I ribozyme

Nearby chains