HL_1YI2_075
3D structure
- PDB id
- 1YI2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure Of Erythromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.65 Å
Loop
- Sequence
- UACCCAUCCCGAACA
- Length
- 15 nucleotides
- Bulged bases
- 1YI2|1|9|C|40
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1YI2_075 not in the Motif Atlas
- Homologous match to HL_4V9F_074
- Geometric discrepancy: 0.0562
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
1YI2|1|9|U|33
1YI2|1|9|A|34
1YI2|1|9|C|35
1YI2|1|9|C|36
1YI2|1|9|C|37
1YI2|1|9|A|38
1YI2|1|9|U|39
1YI2|1|9|C|40
1YI2|1|9|C|41
1YI2|1|9|C|42
1YI2|1|9|G|43
1YI2|1|9|A|44
1YI2|1|9|A|45
1YI2|1|9|C|46
1YI2|1|9|A|47
Current chains
- Chain 9
- 5S Ribosomal RNA
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- 50S ribosomal protein L5P
- Chain N
- 50S ribosomal protein L18P
Coloring options: