HL_1Z58_019

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CCGAAUAG

Length

8 nucleotides

Bulged bases

1Z58|1|2|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_019 not in the Motif Atlas

Homologous match to HL_7A0S_021

Geometric discrepancy: 0.3637

The information below is about HL_7A0S_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81314.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

1Z58|1|2|C|651
1Z58|1|2|C|652
1Z58|1|2|G|653
1Z58|1|2|A|654
1Z58|1|2|A|655
1Z58|1|2|U|656
1Z58|1|2|A|657
1Z58|1|2|G|658

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains