HL_1Z58_022

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GUGAAAAGC

Length

9 nucleotides

Bulged bases

1Z58|1|2|A|794

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_022 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.5452

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_91813.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

24

Unit IDs

1Z58|1|2|G|791
1Z58|1|2|U|792
1Z58|1|2|G|793
1Z58|1|2|A|794
1Z58|1|2|A|795
1Z58|1|2|A|796
1Z58|1|2|A|797
1Z58|1|2|G|798
1Z58|1|2|C|799

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains