HL_1Z58_033

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGUCAAGAUUCC

Length

12 nucleotides

Bulged bases

1Z58|1|2|U|1409

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_033 not in the Motif Atlas

Geometric match to HL_5ID6_001

Geometric discrepancy: 0.2897

The information below is about HL_5ID6_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

1Z58|1|2|G|1401
1Z58|1|2|G|1402
1Z58|1|2|U|1403
1Z58|1|2|C|1404
1Z58|1|2|A|1405
1Z58|1|2|A|1406
1Z58|1|2|G|1407
1Z58|1|2|A|1408
1Z58|1|2|U|1409
1Z58|1|2|U|1410
1Z58|1|2|C|1411
1Z58|1|2|C|1412

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains