HL_1Z58_071

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CGCUCAAGGGCGAUCGGGUCAGAAAAUCUACCGGUCACAUGCCUCAGACG

Length

50 nucleotides

Bulged bases

1Z58|1|2|C|1489, 1Z58|1|2|U|1505, 1Z58|1|2|C|1506, 1Z58|1|2|A|1507, 1Z58|1|2|U|1513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|C|1487
1Z58|1|2|G|1488
1Z58|1|2|C|1489
1Z58|1|2|U|1490
1Z58|1|2|C|1491
1Z58|1|2|A|1492
1Z58|1|2|A|1493
1Z58|1|2|G|1494
1Z58|1|2|G|1495
1Z58|1|2|G|1496
1Z58|1|2|C|1497
1Z58|1|2|G|1498
1Z58|1|2|A|1499
1Z58|1|2|U|1500
1Z58|1|2|C|1501
1Z58|1|2|G|1502
1Z58|1|2|G|1503
1Z58|1|2|G|1504
1Z58|1|2|U|1505
1Z58|1|2|C|1506
1Z58|1|2|A|1507
1Z58|1|2|G|1508
1Z58|1|2|A|1509
1Z58|1|2|A|1510
1Z58|1|2|A|1511
1Z58|1|2|A|1512
1Z58|1|2|U|1513
1Z58|1|2|C|1514
1Z58|1|2|U|1515
1Z58|1|2|A|1516
1Z58|1|2|C|1517
1Z58|1|2|C|1518
1Z58|1|2|G|1519
1Z58|1|2|G|1520
1Z58|1|2|U|1521
1Z58|1|2|C|1522
1Z58|1|2|A|1523
1Z58|1|2|C|1524
1Z58|1|2|A|1525
1Z58|1|2|U|1526
1Z58|1|2|G|1527
1Z58|1|2|C|1528
1Z58|1|2|C|1529
1Z58|1|2|U|1530
1Z58|1|2|C|1531
1Z58|1|2|A|1532
1Z58|1|2|G|1533
1Z58|1|2|A|1534
1Z58|1|2|C|1535
1Z58|1|2|G|1536

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains