HL_1Z58_083

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGAGGUUGGCUUAGAAGCAGCCACCCUUCAAAGAGUGCGUAAUAGCUCAC

Length

50 nucleotides

Bulged bases

1Z58|1|2|G|1073, 1Z58|1|2|A|1078, 1Z58|1|2|A|1081, 1Z58|1|2|A|1099, 1Z58|1|2|G|1100

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|G|1066
1Z58|1|2|G|1067
1Z58|1|2|A|1068
1Z58|1|2|G|1069
1Z58|1|2|G|1070
1Z58|1|2|U|1071
1Z58|1|2|U|1072
1Z58|1|2|G|1073
1Z58|1|2|G|1074
1Z58|1|2|C|1075
1Z58|1|2|U|1076
1Z58|1|2|U|1077
1Z58|1|2|A|1078
1Z58|1|2|G|1079
1Z58|1|2|A|1080
1Z58|1|2|A|1081
1Z58|1|2|G|1082
1Z58|1|2|C|1083
1Z58|1|2|A|1084
1Z58|1|2|G|1085
1Z58|1|2|C|1086
1Z58|1|2|C|1087
1Z58|1|2|A|1088
1Z58|1|2|C|1089
1Z58|1|2|C|1090
1Z58|1|2|C|1091
1Z58|1|2|U|1092
1Z58|1|2|U|1093
1Z58|1|2|C|1094
1Z58|1|2|A|1095
1Z58|1|2|A|1096
1Z58|1|2|A|1097
1Z58|1|2|G|1098
1Z58|1|2|A|1099
1Z58|1|2|G|1100
1Z58|1|2|U|1101
1Z58|1|2|G|1102
1Z58|1|2|C|1103
1Z58|1|2|G|1104
1Z58|1|2|U|1105
1Z58|1|2|A|1106
1Z58|1|2|A|1107
1Z58|1|2|U|1108
1Z58|1|2|A|1109
1Z58|1|2|G|1110
1Z58|1|2|C|1111
1Z58|1|2|U|1112
1Z58|1|2|C|1113
1Z58|1|2|A|1114
1Z58|1|2|C|1115

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains