HL_1ZO1_002
3D structure
- PDB id
- 1ZO1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.8 Å
Loop
- Sequence
- GACUGAAGAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1ZO1_002 not in the Motif Atlas
- Homologous match to HL_5IB8_208
- Geometric discrepancy: 0.4126
- The information below is about HL_5IB8_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36684.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
1ZO1|1|F|G|30
1ZO1|1|F|A|31
1ZO1|1|F|C|32
1ZO1|1|F|U|33
1ZO1|1|F|G|34
1ZO1|1|F|A|35
1ZO1|1|F|A|36
1ZO1|1|F|G|37
1ZO1|1|F|A|38
1ZO1|1|F|U|39
1ZO1|1|F|C|40
Current chains
- Chain F
- P/I-site tRNA
Nearby chains
No other chains within 10ÅColoring options: