3D structure

PDB id
1ZO1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex
Experimental method
ELECTRON MICROSCOPY
Resolution
13.8 Å

Loop

Sequence
GACUGAAGAUC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_1ZO1_002 not in the Motif Atlas
Homologous match to HL_5IB8_208
Geometric discrepancy: 0.4126
The information below is about HL_5IB8_208
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_36684.4
Basepair signature
cWW-F-F-F-F-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

1ZO1|1|F|G|30
1ZO1|1|F|A|31
1ZO1|1|F|C|32
1ZO1|1|F|U|33
1ZO1|1|F|G|34
1ZO1|1|F|A|35
1ZO1|1|F|A|36
1ZO1|1|F|G|37
1ZO1|1|F|A|38
1ZO1|1|F|U|39
1ZO1|1|F|C|40

Current chains

Chain F
P/I-site tRNA

Nearby chains

No other chains within 10Å

Coloring options:


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