HL_1ZO1_003
3D structure
- PDB id
- 1ZO1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.8 Å
Loop
- Sequence
- GUUCGAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1ZO1_003 not in the Motif Atlas
- Homologous match to HL_4V90_034
- Geometric discrepancy: 0.3005
- The information below is about HL_4V90_034
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
1ZO1|1|F|G|53
1ZO1|1|F|U|54
1ZO1|1|F|U|55
1ZO1|1|F|C|56
1ZO1|1|F|G|57
1ZO1|1|F|A|58
1ZO1|1|F|U|59
1ZO1|1|F|C|60
1ZO1|1|F|C|61
Current chains
- Chain F
- P/I-site tRNA
Nearby chains
No other chains within 10ÅColoring options: