HL_22TU_023

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|C|1436
22TU|1|L5|C|1437
22TU|1|L5|U|1438
22TU|1|L5|C|1439
22TU|1|L5|U|1440
22TU|1|L5|C|1441
22TU|1|L5|C|1442
22TU|1|L5|A|1443
22TU|1|L5|G|1444
22TU|1|L5|U|1445
22TU|1|L5|C|1446
22TU|1|L5|C|1447
22TU|1|L5|G|1448

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain Lb

60S ribosomal protein L29