HL_22TU_054

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

22TU|1|L5|A|3876, 22TU|1|L5|A|3877, 22TU|1|L5|C|3878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|G|3873
22TU|1|L5|G|3874
22TU|1|L5|G|3875
22TU|1|L5|A|3876
22TU|1|L5|A|3877
22TU|1|L5|C|3878
22TU|1|L5|G|3879
22TU|1|L5|G|3880
22TU|1|L5|G|3881
22TU|1|L5|C|3882

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain Le

60S ribosomal protein L32