HL_22TU_098

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|S2|A|957
22TU|1|S2|G|958
22TU|1|S2|G|959
22TU|1|S2|U|960
22TU|1|S2|G|961
22TU|1|S2|A|962
22TU|1|S2|A|963
22TU|1|S2|A|964
22TU|1|S2|U|965
22TU|1|S2|U|966

Current chains

Chain S2

18S rRNA

Nearby chains

Chain C4

Transfer RNA; tRNA

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain SF

40S ribosomal protein S5

Chain SO

40S ribosomal protein S14