HL_23WI_021

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

23WI|1|5|C|1870, 23WI|1|5|A|1871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_23WI_021 not in the Motif Atlas

Geometric match to HL_6N5P_002

Geometric discrepancy: 0.298

The information below is about HL_6N5P_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64374.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

23WI|1|5|C|1868
23WI|1|5|G|1869
23WI|1|5|C|1870
23WI|1|5|A|1871
23WI|1|5|A|1872
23WI|1|5|G|1873

Current chains

Chain 5

RNA (2014-MER)

Nearby chains