HL_23WI_073

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_23WI_073 not in the Motif Atlas

Geometric match to HL_8B0X_020

Geometric discrepancy: 0.1686

The information below is about HL_8B0X_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

23WI|1|a|C|186
23WI|1|a|G|187
23WI|1|a|C|188
23WI|1|a|A|189
23WI|1|a|A|190
23WI|1|a|G|191

Current chains

Chain a

RNA (1539-MER)

Nearby chains

Chain t

Small ribosomal subunit protein bS20