HL_23WI_077
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_23WI_077 not in the Motif Atlas
- Homologous match to HL_6CZR_079
- Geometric discrepancy: 0.1553
- The information below is about HL_6CZR_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.2
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
23WI|1|a|A|320
23WI|1|a|A|321
23WI|1|a|C|322
23WI|1|a|U|323
23WI|1|a|G|324
23WI|1|a|A|325
23WI|1|a|G|326
23WI|1|a|A|327
23WI|1|a|C|328
23WI|1|a|A|329
23WI|1|a|C|330
23WI|1|a|G|331
23WI|1|a|G|332
23WI|1|a|U|333
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain p
- 30S ribosomal protein S16
- Chain t
- Small ribosomal subunit protein bS20
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