HL_23WI_081

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

23WI|1|a|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_23WI_081 not in the Motif Atlas

Geometric match to HL_8B0X_011

Geometric discrepancy: 0.1915

The information below is about HL_8B0X_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.5

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

23WI|1|a|G|462
23WI|1|a|U|463
23WI|1|a|U|464
23WI|1|a|A|465
23WI|1|a|A|466
23WI|1|a|U|467
23WI|1|a|A|468
23WI|1|a|C|469
23WI|1|a|C|470

Current chains

Chain a

RNA (1539-MER)

Nearby chains