HL_23WI_091

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_23WI_091 not in the Motif Atlas

Homologous match to HL_6CZR_217

Geometric discrepancy: 0.3455

The information below is about HL_6CZR_217

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

23WI|1|a|A|1012
23WI|1|a|G|1013
23WI|1|a|A|1014
23WI|1|a|G|1015
23WI|1|a|A|1016
23WI|1|a|U|1017

Current chains

Chain a

RNA (1539-MER)

Nearby chains

Chain n

Small ribosomal subunit protein uS14

Chain s

Small ribosomal subunit protein uS19