HL_23WI_094

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

23WI|1|a|C|1136, 23WI|1|a|C|1137

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_23WI_094 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.2742

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

23WI|1|a|G|1134
23WI|1|a|U|1135
23WI|1|a|C|1136
23WI|1|a|C|1137
23WI|1|a|G|1138
23WI|1|a|G|1139
23WI|1|a|C|1140

Current chains

Chain a

RNA (1539-MER)

Nearby chains

Chain i

Small ribosomal subunit protein uS9