HL_28LN_046

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGUAAACUCC

Length

10 nucleotides

Bulged bases

28LN|1|B5|G|315, 28LN|1|B5|U|316

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|G|314
28LN|1|B5|G|315
28LN|1|B5|U|316
28LN|1|B5|A|317
28LN|1|B5|A|318
28LN|1|B5|A|319
28LN|1|B5|C|320
28LN|1|B5|U|321
28LN|1|B5|C|322
28LN|1|B5|C|323

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BN

60S ribosomal protein L15

Chain Ba

Large ribosomal subunit protein uL15

Chain Bi

60S ribosomal protein L36

Chain Bo

Large ribosomal subunit protein eL42