HL_28LN_063
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGAUGAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_28LN_063 not in the Motif Atlas
- Homologous match to HL_9H3G_032
- Geometric discrepancy: 0.1363
- The information below is about HL_9H3G_032
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47171.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
28LN|1|B5|G|1885
28LN|1|B5|G|1886
28LN|1|B5|A|1887
28LN|1|B5|U|1888
28LN|1|B5|G|1889
28LN|1|B5|A|1890
28LN|1|B5|A|1891
28LN|1|B5|C|1892
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B7
- 5S ribosomal RNA; 5S rRNA
- Chain BF
- Large ribosomal subunit protein uL30
- Chain Be
- 60S ribosomal protein L32
- Chain Bf
- 60S ribosomal protein L35a
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