HL_28LN_072

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUUCAGAUCC

Length

10 nucleotides

Bulged bases

28LN|1|B5|U|2529, 28LN|1|B5|C|2530

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|G|2522
28LN|1|B5|U|2523
28LN|1|B5|U|2524
28LN|1|B5|C|2525
28LN|1|B5|A|2526
28LN|1|B5|G|2527
28LN|1|B5|A|2528
28LN|1|B5|U|2529
28LN|1|B5|C|2530
28LN|1|B5|C|2531

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

60S ribosomal protein L19

Chain BX

60S ribosomal protein L23a

Chain Bg

60S ribosomal protein L34