HL_28LN_075
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUUCUCUU(PSU)
- Length
- 9 nucleotides
- Bulged bases
- 28LN|1|B5|U|2630
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_28LN_075 not in the Motif Atlas
- Homologous match to HL_9PN5_036
- Geometric discrepancy: 0.1738
- The information below is about HL_9PN5_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22758.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
28LN|1|B5|G|2623
28LN|1|B5|U|2624
28LN|1|B5|U|2625
28LN|1|B5|C|2626
28LN|1|B5|U|2627
28LN|1|B5|C|2628
28LN|1|B5|U|2629
28LN|1|B5|U|2630
28LN|1|B5|PSU|2631
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BR
- 60S ribosomal protein L19
- Chain BU
- 60S ribosomal protein L22
- Chain Bv
- Transcription factor BTF3
Coloring options: