HL_28LN_092

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UCAAACGGUA(6MZ)CG

Length

13 nucleotides

Bulged bases

28LN|1|B5|A|4213, 28LN|1|B5|C|4220

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|U|4209
28LN|1|B5|C|4210
28LN|1|B5|A|4211
28LN|1|B5|A|4212
28LN|1|B5|A|4213
28LN|1|B5|C|4214
28LN|1|B5|G|4215
28LN|1|B5|G|4216
28LN|1|B5|U|4217
28LN|1|B5|A|4218
28LN|1|B5|6MZ|4219
28LN|1|B5|C|4220
28LN|1|B5|G|4221

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BI

60S ribosomal protein L10

Chain BT

60S ribosomal protein L21

Chain Bb

Large ribosomal subunit protein eL29